Original Articles

Determination of Antimicrobial Resistance Pattern and Detection of blaTEM Gene among Clinical Isolates of Escherichia coli

Abstract

Background:    Unfortunately, antibiotic resistance has become an increasingly critical problem in many countries like Iran. Since there are very few published data on antibiotics resistance in Alborz province, the aim of this study was to survey the pattern of antimicrobial resistance and prevalence detection of TEM-type beta-lactamases among clinical isolates of Escherichia coli using universal primers.

 

Methods:    The study was performed on 83 clinical Escherichia coli strains collected from hospitals and clinical laboratories. Antimicrobial susceptibility was performed using Kirby-Bauer disk diffusion method against common antibiotics. Isolates were also screened for the production of extended spectrum beta-lactamases (ESBLs) by double disk synergy test (DDST). Positive isolates were evaluated by PCR analysis for the TEM family of ESBLs genes.

 

Results:   Isolates showed the highest resistance to amoxicillin (83%), whereas nitrofurantoin was the most effective drug, with only 8.4% resistance. The frequency of multi drug resistance (MDR) to more than 5 antibiotics was 79.5% (66 strains). ESBL screening of E. coli strains by DDST showed that out of 83 strains, 33 isolates were ESBL positive. Based on the PCR results 61 percent of phenotypic ESBL positive E. coli isolates possessed a single gene encoding a TEM type ESBL.

Conclusion:   As the results of this study indicate, multidrug resistance is an increasing therapeutic concern and treatment requires further attention to the results of susceptibility tests. As antibiotic options in the treatment of ESBL-producing organisms are extremely limited, molecular screening by laboratories is suggested to reduce the risk of therapeutic defeat.

Japoni A, Gudarzi M, Farshad SH, et al. Assay for integrons and pattern of antibiotic resistance in clinical Escherichia coli strains by PCR-RFLP in southern Iran. Jpn J Infect Dis 2008; 61(1): 85-88.

Knothe H, Shah P, Krcmery V, et al. Transferrable resistance to cefotaxime, cefoxitin, cefamandole and cefuroxime in clinical isolates of Klebsiella pneumoniae and Serratia marcescens.

Infection 1993; 11(6): 315-317.

Heritage J, M’Zali FH, Gascoyne-Binzi D, et al. Evolution and spread of SHV extended-spectrum beta lactamases in gram-negative bacteria. J Antimicrob Chemother 1999; 44(3): 309-318.

Jacoby GA, Medeiros AA. More extended spectrum beta-lactamases. Antimicrob Agents Chemother 1991; 35(9): 1697-1704.

Farajnia S, Azhari F, Alikhani MY, et al. Prevalence of PER and VEB Type Extended Spectrum Betalactamases among Multidrug Resistant Acinetobacter baumannii Isolates in North-West of Iran. Iran J Basic Med Sci 2013; 16(6): 751-755.

Tabbouche S, Khudary R, Beyrouthy R, et al. Detection of genes TEM, OXA, SHV and CTX-M in 73 clinical isolates of Escherichia coli producers of extended spectrum Beta-lactamases and determination of their susceptibility to antibiotics. Int Arabic J Antimicrob Agent 2001; 5(1): 1-5.

Sharma J, Sharma M, Ray P. Detection of TEM & SHV genes in Escherichia coli & Klebsiella pneumoniae isolates in a tertiary care hospital from India. Indian J Med Res 2010; 132: 332-336.

Eckert C, Gautier V, Arlet G. DNA sequence analysis of the genetic environment of various blaCTX-M genes. J Antimicrob Chemother 2006; 57(1): 14-23.

Paterson DL, Bonomo RA. Extended-Spectrum β-Lactamases: a Clinical Update. Clin Microbiol Rev 2005; 18(4): 657-686.

Lin CF, Hsu SK, Chen CH, et al. Genotypic detection and molecular epidemiology of extended-spectrum b-lactamase-producing Escherichia coli and Klebsiella pneumoniae in a regional hospital in central Taiwan. J Med Microbiol 2010; 59(6): 665-671.

Pourakbari B, Ferdosian F, Mahmoudi SH, et al. Increase resistant rates and ESBL production between E. coli isolates causing urinary tract infection in young patients from Iran. Braz J Microbiol 2012; 43(2): 776-769.

Schlager TA, Hendley JO, Bell AL.

Clonal Diversity of Escherichia coli Colonizing Stools and Urinary Tracts of Young Girls. Infect Immun 2002; 70(3): 1225-1229.

Cockerill FR. ed. Performance standards for antimicrobial susceptibility testing: twenty-first informational supplement. Clinical and Laboratory Standards Institute (CLSI), 2011.

Jarlier V, Nicolas MH, Fournier G, et al. Extended broad-spectrum β-lactamases conferring transferable resistance to newer β-lactam agents in Enterobacteriaceae: hospital prevalence and susceptibility pattern. Rev Infect Dis 1988; 10(4):867-878.

Queipo-Ortuno M I, Colmenero JD, Macias M, et al. Preparation of Bacterial DNA Template by Boiling and Effect of Immunoglobulin G as an Inhibitor in Real-Time PCR for Serum Samples from Patients with Brucellosis. Clin Vaccine Immunol 2008; 15(2): 293-296.

Khoshbakht R, Salimi A, Shirzd Aski H, et al. Antibiotic susceptibility of bacterial strains isolated from urinary tarct infections from Karaj, Iran. Jundishapor J Microbiol 2013; 6(1): 86-90.

Mansouri M, Abbasi S. Prevalence of

multiple drug resistance in clinical isolates

of extended spectrum beta-lactamase

producing Enterobacteriaceae in southeast

Iran. Iran J Med Sci 2010; 35(2):101-108.

Costa D, Poeta P, Saenz Y, et al. Detection

of Escherichia coli harbouring extended

-spectrum b-lactamases of the CTX-M,

TEM and SHV classes in faecal samples of

wild animals in Portugal. J Antimicrob

Chemother 2006; 58(6): 1311-1312.

Pitout JD, Nordmann P, Laupland KB, et al. Emergence of Enterobacteriaceae producing extended-spectrum beta-lactamases (ESBLs) in the community. J Antimicrob Chemother 2005; 56(1): 52-59.

Shayanfar N, Rezaei M, Ahmadi M, et al. Evaluation of extended spectrum beta lactamase positive strain of Klebsiella pneumonia and Escherichia coli in bacterial culture. Iran J Pathol 2010; 5(1): 34-39.

Shahcheraghi F, Nasiri S, Noveiri H. Detection of extended-spectrum β-lactamases (ESBLs) in Escherichia coli. Iranian J Clin Infect Dis 2009; 4:65-70.

Deepti R, Deepti N. Extended-spectrum β-lactamases in Gram Negative Bacteria. J Glob Infect Dis. 2010; 2(3): 263–274.

Goel S, Kanta S. Prevalence of Nocardia species in the soil of Patiala area. Indian J of Pathol & Microbiol 1993; 36(1): 53-60.

Gelderen de Komaid A, Runco de Laborda R, Salim R. Natural occurrence of Nocardia in soil of Tucumán: Physiological characteristics. Mycopathologi 1987; 99(1): 15-9.

Files
IssueVol 4 No 3-4 (2015) QRcode
SectionOriginal Articles
Keywords
Antibiotic resistance E. coli ESBL gene PCR

Rights and permissions
Creative Commons License This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.
How to Cite
1.
Haddadi A, Mirmostafa SM, Shavandi M. Determination of Antimicrobial Resistance Pattern and Detection of blaTEM Gene among Clinical Isolates of Escherichia coli. J Med Bacteriol. 2015;4(3-4):8-14.